Stem-loop xla-mir-428b

Accession

MI0038333

Description

Xenopus laevis xla-mir-428b precursor miRNA

Sequence

AGCCAAACAGAAGCUCAUUCuuguugucucuaugagAAAGUGCUUCUCGUUCGGCUGA
((((.(((((((((.(.(((((((.......))))))).).)))))).))).))))..

Structure

--    A   -      U A       ug 
  AGCC AAC AGAAGC C UUCuugu  u
  |||| ||| |||||| | |||||||  c
  UCGG UUG UCUUCG G AAgagua  u
AG    C   C      U A       uc 

Annotation confidence Not enough data

Genome context

chr8L: 529335-529392 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-428b

Mature xla-miR-428b-5p

• Accession: MIMAT0046599
• Description: Xenopus laevis xla-miR-428b-5p mature miRNA
• Sequence: 1 - AGCCAAACAGAAGCUCAUUC - 20
• Evidence: experimental ; Illumina [1]

Mature xla-miR-428b-3p

• Accession: MIMAT0046600
• Description: Xenopus laevis xla-miR-428b-3p mature miRNA
• Sequence: 37 - AAAGUGCUUCUCGUUCGGCUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38