miRBase entry: xla-mir-34b

Stem-loop xla-mir-34b


Accession
MI0038326
Description
Xenopus laevis xla-mir-34b precursor miRNA

Literature search
1 open access papers mention xla-mir-34b
(1 sentences)

Sequence

AGGCAGUGUAGUUAGCUGAUUGuguuauaucaaaugugcaAUCACUAACUAAACUGCCAUC
.((((((.(((((((.(((((((..(((.....))).)))))))))))))).))))))...

Structure
--A      G       C       gu   a 
   GGCAGU UAGUUAG UGAUUGu  uau u
   |||||| ||||||| |||||||  ||| c
   CCGUCA AUCAAUC ACUAacg  gua a
CUA      A       -       -u   a 


Annotation confidence Not enough data
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Genome context
chr7S: 61650543-61650603 [+]

Database links

Mature xla-miR-34b-5p

Accession MIMAT0046586
Description Xenopus laevis xla-miR-34b-5p mature miRNA
Sequence 1 - AGGCAGUGUAGUUAGCUGAUUG - 22
Evidence experimental
Illumina [1]

Mature xla-miR-34b-3p

Accession MIMAT0046587
Description Xenopus laevis xla-miR-34b-3p mature miRNA
Sequence 41 - AUCACUAACUAAACUGCCAUC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38