miRBase entry: xla-mir-30c

Stem-loop xla-mir-30c


Accession
MI0038319
Description
Xenopus laevis xla-mir-30c precursor miRNA


Sequence

UGUAAACAUCCUACACUCUCAGCUGugaacauaaggugGCUGGGAGAAGGGUGUUUACCCC
.(((((((((((...(((((((((.............))))))))).)))))))))))...

Structure
--U           ACA         Gugaa 
   GUAAACAUCCU   CUCUCAGCU     c
   |||||||||||   |||||||||     a
   CAUUUGUGGGA   GAGGGUCGg     u
CCC           --A         uggaa 


Annotation confidence Not enough data
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Genome context
chr2S: 58346625-58346685 [+]

Database links

Mature xla-miR-30c-5p

Accession MIMAT0046572
Description Xenopus laevis xla-miR-30c-5p mature miRNA
Sequence 1 - UGUAAACAUCCUACACUCUCAGCUG - 25
Evidence experimental
Illumina [1]

Mature xla-miR-30c-3p

Accession MIMAT0046573
Description Xenopus laevis xla-miR-30c-3p mature miRNA
Sequence 39 - GCUGGGAGAAGGGUGUUUACCCC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38