miRBase entry: xla-mir-212

Stem-loop xla-mir-212


Accession
MI0038295
Description
Xenopus laevis xla-mir-212 precursor miRNA


Sequence

ACCUUGGCUCUAGACUGCUUACugugaaacugugcuauaggaacaguAACAGUCUACAGUCAUGGCUA
.((.(((((.(((((((.(((((((....((((...))))..)))))))))))))).))))).))...

Structure
--A  U     C       C       gaaa    g 
   CC UGGCU UAGACUG UUACugu    cugu  
   || ||||| ||||||| |||||||    |||| c
   GG ACUGA AUCUGAC AAugaca    gaua  
AUC  U     C       -       --ag    u 


Annotation confidence Not enough data
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Genome context
chr2L: 33469356-33469423 [+]

Database links

Mature xla-miR-212-5p

Accession MIMAT0046532
Description Xenopus laevis xla-miR-212-5p mature miRNA
Sequence 1 - ACCUUGGCUCUAGACUGCUUAC - 22
Evidence experimental
Illumina [1]

Mature xla-miR-212-3p

Accession MIMAT0046533
Description Xenopus laevis xla-miR-212-3p mature miRNA
Sequence 48 - AACAGUCUACAGUCAUGGCUA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38