Stem-loop xla-mir-19a

Accession

MI0038284

Description

Xenopus laevis xla-mir-19a precursor miRNA

Sequence

UCAGUUUUGCAUAGUUGCACUACaagaaaaauguaguUGUGCAAAUCUAUGCAAAACUGAUG
((((((((((((((((((((((((.......))))...))))))..))))))))))))))..

Structure

--              --      ---    ag 
  UCAGUUUUGCAUAG  UUGCAC   UACa  a
  ||||||||||||||  ||||||   ||||  a
  AGUCAAAACGUAUC  AACGUG   augu  a
GU              UA      Uug    aa 

Annotation confidence Not enough data

Genome context

chr2L: 107332210-107332271 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from xla-mir-19a

Mature xla-miR-19a-5p

• Accession: MIMAT0046512
• Description: Xenopus laevis xla-miR-19a-5p mature miRNA
• Sequence: 1 - UCAGUUUUGCAUAGUUGCACUAC - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-19a-3p

• Accession: MIMAT0046513
• Description: Xenopus laevis xla-miR-19a-3p mature miRNA
• Sequence: 38 - UGUGCAAAUCUAUGCAAAACUGAUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38