miRBase entry: xla-mir-140-2

Stem-loop xla-mir-140-2


Accession
MI0038252
Description
Xenopus laevis xla-mir-140-2 precursor miRNA


Sequence

CCAGUGGUUUUACCCUAUGGUAGGuuacgucaggcuguucUACCACAGGGUAGAACCACGGAC
((.(((((((((((((.(((((((.(((.....).)).))))))).)))))))))))))))..

Structure
--  A             A       u  - g 
  CC GUGGUUUUACCCU UGGUAGG ua c u
  || ||||||||||||| ||||||| || | c
  GG CACCAAGAUGGGA ACCAUcu gu g a
CA  -             C       u  c g 


Annotation confidence Not enough data
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Genome context
Sc000039_chrNA: 150696-150758 [-]

Database links

Mature xla-miR-140-5p

Accession MIMAT0046452
Description Xenopus laevis xla-miR-140-5p mature miRNA
Sequence 1 - CCAGUGGUUUUACCCUAUGGUAGG - 24
Evidence experimental
Illumina [1]

Mature xla-miR-140-3p

Accession MIMAT0046453
Description Xenopus laevis xla-miR-140-3p mature miRNA
Sequence 41 - UACCACAGGGUAGAACCACGGAC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38