miRBase entry: xla-mir-107

Stem-loop xla-mir-107


Accession
MI0038232
Description
Xenopus laevis xla-mir-107 precursor miRNA

Literature search
1 open access papers mention xla-mir-107
(1 sentences)

Sequence

AGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAU
((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))..

Structure
--    U  U           C   u   a 
  AGCU CU UACAGUGUUGC UUG ggc u
  |||| || ||||||||||| ||| ||| g
  UCGG GA AUGUUACGACG Aac uug g
UA    -  C           -   -   a 


Annotation confidence Not enough data
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Genome context
chr7S: 24233759-24233816 [+]

Database links

Mature xla-miR-107-5p

Accession MIMAT0046420
Description Xenopus laevis xla-miR-107-5p mature miRNA
Sequence 1 - AGCUUCUUUACAGUGUUGCCUUG - 23
Evidence experimental
Illumina [1]

Mature xla-miR-107-3p

Accession MIMAT0046421
Description Xenopus laevis xla-miR-107-3p mature miRNA
Sequence 38 - AGCAGCAUUGUACAGGGCUAU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38