Stem-loop xla-mir-106

Accession

MI0038231

Description

Xenopus laevis xla-mir-106 precursor miRNA

Sequence

AAAAGUGCUUAUAGUGCAGGUAGaacuuagaccuACUGCACAGUAAGCACUUCCUG
..((((((((((.((((((.(((.........))))))))).))))))))))....

Structure

--AA          A      G   aac 
    AAGUGCUUAU GUGCAG UAG   u
    |||||||||| |||||| |||   u
    UUCACGAAUG CACGUC Auc   a
GUCC          A      -   cag 

Annotation confidence Not enough data

Genome context

chr8L: 48822350-48822405 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from xla-mir-106

Mature xla-miR-106-5p

• Accession: MIMAT0046418
• Description: Xenopus laevis xla-miR-106-5p mature miRNA
• Sequence: 1 - AAAAGUGCUUAUAGUGCAGGUAG - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-106-3p

• Accession: MIMAT0046419
• Description: Xenopus laevis xla-miR-106-3p mature miRNA
• Sequence: 35 - ACUGCACAGUAAGCACUUCCUG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38