miRBase entry: pte-mir-11966

Stem-loop pte-mir-11966


Accession
MI0038153
Description
Parasteatoda tepidariorum pte-mir-11966 precursor miRNA


Sequence

CCCAACCUAAUAUUUAUUUCUGaguucaaaaauugaucucAGAAAUAAAUAUUGGGUUGGGU
((((((((((((((((((((((((.((((...)))).)))))))))))))))))))))))).

Structure
-                        u    a 
 CCCAACCUAAUAUUUAUUUCUGag ucaa  
 |||||||||||||||||||||||| |||| a
 GGGUUGGGUUAUAAAUAAAGAcuc aguu  
U                        u    a 


Annotation confidence Not enough data
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Genome context
Scf5bK3_465: 3479204-3479265 [+]

Database links

Mature pte-miR-11966-5p

Accession MIMAT0046326
Description Parasteatoda tepidariorum pte-miR-11966-5p mature miRNA
Sequence 1 - CCCAACCUAAUAUUUAUUUCUG - 22
Evidence experimental
Illumina [1]

Mature pte-miR-11966-3p

Accession MIMAT0046327
Description Parasteatoda tepidariorum pte-miR-11966-3p mature miRNA
Sequence 41 - AGAAAUAAAUAUUGGGUUGGGU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144