miRBase entry: pte-mir-11964

Stem-loop pte-mir-11964


Accession
MI0038150
Description
Parasteatoda tepidariorum pte-mir-11964 precursor miRNA


Sequence

AGAUAAAUGUAUAUCUGGUCUugugaaauuaauaaucaUGACUAGAUAUUCCAUUUAUCU
(((((((((.((((((((((..((((.........))))))))))))))..)))))))))

Structure
         -U          Uu    aau 
AGAUAAAUG  AUAUCUGGUC  guga   u
|||||||||  ||||||||||  ||||   a
UCUAUUUAC  UAUAGAUCAG  Uacu   a
         CU          --    aau 


Annotation confidence Not enough data
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Genome context
Scf5bK3_169: 3166310-3166369 [-]

Database links

Mature pte-miR-11964-5p

Accession MIMAT0046322
Description Parasteatoda tepidariorum pte-miR-11964-5p mature miRNA
Sequence 1 - AGAUAAAUGUAUAUCUGGUCU - 21
Evidence experimental
Illumina [1]

Mature pte-miR-11964-3p

Accession MIMAT0046323
Description Parasteatoda tepidariorum pte-miR-11964-3p mature miRNA
Sequence 39 - UGACUAGAUAUUCCAUUUAUCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144