Stem-loop sequence pte-mir-11962b

AccessionMI0038145 (change log)
DescriptionParasteatoda tepidariorum miR-11962b stem-loop
Stem-loop 
   --    u                c  cuu 
5'   caua uucaaaaauggcauca gu   g
     |||| |||||||||||||||| ||   c
3'   guau gaguuuuuaccguagu ua   u
   au    c                c  uaa
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
Scf5bK3_265: 10550016-10550074 [+]
intergenic
Clustered miRNAs
< 10kb from pte-mir-11962b
pte-mir-11962aScf5bK3_265: 10546954-10547012 [+]
pte-mir-11962bScf5bK3_265: 10550016-10550074 [+]
Database links

Mature sequence pte-miR-11962b-5p

Accession MIMAT0046314
Sequence

1 -  

cauauuucaaaaauggcaucac

 - 22

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pte-miR-11962b-3p

Accession MIMAT0046315
Sequence

38 -  

gaugccauuuuugagcuaugua

 - 59

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).