Stem-loop sequence pte-mir-11959-1

Accession

MI0038138 (change log)

Description

Parasteatoda tepidariorum miR-11959-1 stem-loop

Stem-loop

   ---g     a   ua   a        a 
5'     agggu aac  agc uauccgaa a
       ||||| |||  ||| ||||||||  
3'     uccua uug  ucg auaggcuu u
   uuua     g   gc   a        c 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: Scf5bK3_230: 10895496-10895550 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038138

Mature sequence pte-miR-11959-5p

• Accession: MIMAT0046302
• Sequence: 1 - gaggguaaacuaagcauauc - 20
• Evidence: experimental; Illumina [1]

Mature sequence pte-miR-11959-3p

• Accession: MIMAT0046303
• Sequence: 34 - auaagcucgguugauccuauuu - 55
• Evidence: experimental; Illumina [1]

References

1. PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).