miRBase entry: pte-mir-11959-1

Stem-loop pte-mir-11959-1


Accession
MI0038138
Description
Parasteatoda tepidariorum pte-mir-11959-1 precursor miRNA


Sequence

GAGGGUAAACUAAGCAUAUCcgaaaaucuucggAUAAGCUCGGUUGAUCCUAUUU
.(((((.((((.(((.((((((((....)))))))).))).)))).)))))....

Structure
---G     A    A   A        a 
    AGGGU AACU AGC UAUCcgaa a
    ||||| |||| ||| ||||||||  
    UCCUA UUGG UCG AUAggcuu u
UUUA     G    C   A        c 


Annotation confidence Not enough data
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Genome context
Scf5bK3_230: 10895496-10895550 [-]

Database links

Mature pte-miR-11959-5p

Accession MIMAT0046302
Description Parasteatoda tepidariorum pte-miR-11959-5p mature miRNA
Sequence 1 - GAGGGUAAACUAAGCAUAUC - 20
Evidence experimental
Illumina [1]

Mature pte-miR-11959-3p

Accession MIMAT0046303
Description Parasteatoda tepidariorum pte-miR-11959-3p mature miRNA
Sequence 34 - AUAAGCUCGGUUGAUCCUAUUU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144