miRBase entry: pte-mir-11948

Stem-loop pte-mir-11948


Accession
MI0038123
Description
Parasteatoda tepidariorum pte-mir-11948 precursor miRNA


Sequence

UAUACGACUUUUCAACAACUUgguugauaacgcaaaaGUUGUCGAACAAGUCGUAUAGU
(((((((((((((.(((((((..(((......)))))))))).))).))))))))))..

Structure
--          -   A       gg   au 
  UAUACGACUU UUC ACAACUU  uug  a
  |||||||||| ||| |||||||  |||   
  AUAUGCUGAA AAG UGUUGaa  aac  a
UG          C   C       --   gc 


Annotation confidence Not enough data
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Genome context
Scf5bK3_332: 2190701-2190759 [+]

Database links

Mature pte-miR-11948-5p

Accession MIMAT0046274
Description Parasteatoda tepidariorum pte-miR-11948-5p mature miRNA
Sequence 1 - UAUACGACUUUUCAACAACUU - 21
Evidence experimental
Illumina [1]

Mature pte-miR-11948-3p

Accession MIMAT0046275
Description Parasteatoda tepidariorum pte-miR-11948-3p mature miRNA
Sequence 38 - GUUGUCGAACAAGUCGUAUAGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144