Stem-loop sequence pte-mir-11947a-2

Accession

MI0038122 (change log)

Description

Parasteatoda tepidariorum miR-11947a-2 stem-loop

Stem-loop

   --                      -    u 
5'   auguguucauagucuguuaguu agcg c
     |||||||||||||||||||||| ||||  
3'   uacacaaguaucagacaauuaa ucgc u
   uu                      a    c 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: Scf5bK3_1054: 3732459-3732517 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038122

Mature sequence pte-miR-11947a-5p

• Accession: MIMAT0046272
• Sequence: 1 - auguguucauagucuguuaguua - 23
• Evidence: experimental; Illumina [1]

Mature sequence pte-miR-11947a-3p

• Accession: MIMAT0046273
• Sequence: 38 - uuaacagacuaugaacacauuu - 59
• Evidence: experimental; Illumina [1]

References

1. PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).