miRBase entry: pte-mir-11946

Stem-loop pte-mir-11946


Accession
MI0038120
Description
Parasteatoda tepidariorum pte-mir-11946 precursor miRNA


Sequence

UGCCACACUGAAGAUUUUACUGacuaauuugcugCGUGAACUCAUUCAGUGUGGCAUG
((((((((((((((.(((((..((......).)..))))).)).))))))))))))..

Structure
--            -  U     UG - ua 
  UGCCACACUGAA GA UUUAC  a c  a
  |||||||||||| || |||||  | |   
  ACGGUGUGACUU CU AAGUG  u g  u
GU            A  C     Cg c uu 


Annotation confidence Not enough data
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Genome context
Scf5bK3_332: 4028663-4028720 [-]

Database links

Mature pte-miR-11946-5p

Accession MIMAT0046270
Description Parasteatoda tepidariorum pte-miR-11946-5p mature miRNA
Sequence 1 - UGCCACACUGAAGAUUUUACUG - 22
Evidence experimental
Illumina [1]

Mature pte-miR-11946-3p

Accession MIMAT0046271
Description Parasteatoda tepidariorum pte-miR-11946-3p mature miRNA
Sequence 35 - CGUGAACUCAUUCAGUGUGGCAUG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144