Stem-loop sequence pte-mir-14

Accession

MI0038117 (change log)

Description

Parasteatoda tepidariorum miR-14 stem-loop

Literature search

1 open access papers mention pte-mir-14
(2 sentences)

Stem-loop

   --  u      - u       u   uucau 
5'   gg agagau c gaaggcu acg     u
     || |||||| | ||||||| |||      
3'   cc ucucua g uuucuga ugc     a
   gc  c      a u       c   uucuu 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates: Scf5bK3_774.1: 775553-775611 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038117

Mature sequence pte-miR-14-5p

• Accession: MIMAT0046264
• Sequence: 1 - gguagagaucugaaggcuuac - 21
• Evidence: experimental; Illumina [1]

Mature sequence pte-miR-14-3p

• Accession: MIMAT0046265
• Sequence: 37 - ucagucuuuugaaucucuccccg - 59
• Evidence: experimental; Illumina [1]

References

1. PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).