miRBase entry: pte-mir-11943

Stem-loop pte-mir-11943


Accession
MI0038116
Description
Parasteatoda tepidariorum pte-mir-11943 precursor miRNA


Sequence

UUGCAAAGUGAAUCGUCAGCUUuaaucucaaguuugUUAUGGUGUACUUCAAGAUGCU
..((((((((.(((((.(((...............)))))))).))))).....))).

Structure
UU   -----     A     C   UUuaau 
  GCA     AAGUG AUCGU AGC      c
  |||     ||||| ||||| |||      u
  CGU     UUCAU UGGUA UUg      c
-U   AGAAC     G     -   uuugaa 


Annotation confidence Not enough data
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Genome context
Scf5bK3_15205: 103124-103181 [-]

Database links

Mature pte-miR-11943-5p

Accession MIMAT0046262
Description Parasteatoda tepidariorum pte-miR-11943-5p mature miRNA
Sequence 1 - UUGCAAAGUGAAUCGUCAGCUU - 22
Evidence experimental
Illumina [1]

Mature pte-miR-11943-3p

Accession MIMAT0046263
Description Parasteatoda tepidariorum pte-miR-11943-3p mature miRNA
Sequence 37 - UUAUGGUGUACUUCAAGAUGCU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144