Stem-loop sequence pte-mir-92a

Accession

MI0038100 (change log)

Description

Parasteatoda tepidariorum miR-92a stem-loop

Literature search

1 open access papers mention pte-mir-92a
(1 sentences)

Stem-loop

   --        gu  uug       ----       
5'   aggucggg  ga   gcaguau    uguaua 
     ||||||||  ||   |||||||    ||||| u
3'   uccggccc  cu   cguuaua    acguag 
   aa        ug  -ca       auca       

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: Scf5bK3_416: 86062-86123 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038100

Mature sequence pte-miR-92a-5p

• Accession: MIMAT0046233
• Sequence: 1 - aggucggggugauuggcaguauu - 23
• Evidence: experimental; Illumina [1]

Mature sequence pte-miR-92a-3p

• Accession: MIMAT0046234
• Sequence: 41 - uauugcacucgucccggccuaa - 62
• Evidence: experimental; Illumina [1]

References

1. PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).