miRBase entry: pte-mir-8

Stem-loop pte-mir-8


Accession
MI0038095
Description
Parasteatoda tepidariorum pte-mir-8 precursor miRNA

Literature search
1 open access papers mention pte-mir-8
(1 sentences)

Sequence

CAUCUUACCAGGCAGUAUUAGAgucaauuugaaaauguucuucUAAUACUGUCAGGUAAAGAUGUC
(((((((((.(((((((((((((..(((........))).))))))))))))).))).))))))..

Structure
--      -   A             uc   uug 
  CAUCUU ACC GGCAGUAUUAGAg  aau   a
  |||||| ||| |||||||||||||  |||    
  GUAGAA UGG CUGUCAUAAUcuu  uug   a
CU      A   A             -c   uaa 


Annotation confidence Not enough data
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Genome context
Scf5bK3_12704: 8666-8731 [+]

Database links

Mature pte-miR-8-5p

Accession MIMAT0046223
Description Parasteatoda tepidariorum pte-miR-8-5p mature miRNA
Sequence 1 - CAUCUUACCAGGCAGUAUUAGA - 22
Evidence experimental
Illumina [1]

Mature pte-miR-8-3p

Accession MIMAT0046224
Description Parasteatoda tepidariorum pte-miR-8-3p mature miRNA
Sequence 44 - UAAUACUGUCAGGUAAAGAUGUC - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144