miRBase entry: pte-mir-3931

Stem-loop pte-mir-3931


Accession
MI0038090
Description
Parasteatoda tepidariorum pte-mir-3931 precursor miRNA

Literature search
1 open access papers mention pte-mir-3931
(2 sentences)

Sequence

AUUUGUACCGAUUCAAUGAUAGCUuuauaaacgaaacUACUUUGAGUCGGUACGAAUCA
((((((((((((((((.(.(((.(((......))).)))).))))))))))))))))..

Structure
--                U A   C   au 
  AUUUGUACCGAUUCAA G UAG Uuu  a
  |||||||||||||||| | ||| |||   
  UAAGCAUGGCUGAGUU C AUc aag  a
AC                U -   a   ca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Scf5bK3_112: 4859479-4859537 [+]

Database links

Mature pte-miR-3931-5p

Accession MIMAT0046215
Description Parasteatoda tepidariorum pte-miR-3931-5p mature miRNA
Sequence 1 - AUUUGUACCGAUUCAAUGAUAGCU - 24
Evidence experimental
Illumina [1]

Mature pte-miR-3931-3p

Accession MIMAT0046216
Description Parasteatoda tepidariorum pte-miR-3931-3p mature miRNA
Sequence 38 - UACUUUGAGUCGGUACGAAUCA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144