Stem-loop sequence pte-mir-35r-3

AccessionMI0038084 (change log)
DescriptionParasteatoda tepidariorum miR-35r-3 stem-loop
Stem-loop 
   --           a       ----      ua 
5'   agaaauuuuuc ucccagu    uaauuu  u
     ||||||||||| |||||||    ||||||  u
3'   ucuuugaaagg aggguca    auuaag  u
   ua           -       cuaa      uu
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
Scf5bK3_786: 6356599-6356660 [-]
intergenic
Clustered miRNAs
< 10kb from pte-mir-35r-3
pte-mir-35kScf5bK3_786: 6359629-6359684 [-]
pte-mir-35j-2Scf5bK3_786: 6359442-6359498 [-]
pte-mir-35e-1Scf5bK3_786: 6359147-6359203 [-]
pte-mir-35r-3Scf5bK3_786: 6356599-6356660 [-]
Database links

Mature sequence pte-miR-35r-5p

Accession MIMAT0046208
Sequence

1 -  

agaaauuuuucaucccaguuaauu

 - 24

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pte-miR-35r-3p

Accession MIMAT0046209
Sequence

41 -  

ucacugggaggaaaguuucuau

 - 62

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).