Stem-loop sequence pte-mir-35p

AccessionMI0038076 (change log)
DescriptionParasteatoda tepidariorum miR-35p stem-loop
Stem-loop 
   -g a       g    a     a    u 
5'   g aaaaugu uuac ucggu auuu a
     | ||||||| |||| ||||| |||| u
3'   c uuuuaca agug ggcca uaaa g
   ua g       g    -     c    c
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates Overlapping transcripts
Scf5bK3_3068: 10790-10846 [+]
intergenic
Clustered miRNAs
< 10kb from pte-mir-35p
pte-mir-35pScf5bK3_3068: 10790-10846 [+]
pte-mir-35j-1Scf5bK3_3068: 12165-12221 [+]
pte-mir-35e-2Scf5bK3_3068: 12460-12516 [+]
pte-mir-35n-1Scf5bK3_3068: 16552-16610 [+]
pte-mir-35q-1Scf5bK3_3068: 17321-17380 [+]
pte-mir-35q-1Scf5bK3_3068: 17457-17516 [+]
pte-mir-35r-2Scf5bK3_3068: 20244-20305 [+]
Database links

Mature sequence pte-miR-35p-5p

Accession MIMAT0046196
Sequence

1 -  

ggaaaaauguguuacaucgguaa

 - 23

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pte-miR-35p-3p

Accession MIMAT0046197
Sequence

35 -  

ucaccgggugagacauuuugcau

 - 57

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).