miRBase entry: pte-mir-277a

Stem-loop pte-mir-277a


Accession
MI0038032
Description
Parasteatoda tepidariorum pte-mir-277a precursor miRNA


Sequence

CGUUCCAGAAGUGCGUUUACAuuagugucuuaagaaaucugUAAAUGCAUUUUCUGGAAUGUA
(((((((((((((((((((((...((.((....)).)).)))))))))).)))))))))))..

Structure
--           -          uua  g  u 
  CGUUCCAGAAG UGCGUUUACA   gu uc u
  ||||||||||| ||||||||||   || ||  
  GUAAGGUCUUU ACGUAAAUgu   ua ag a
AU           U          --c  a  a 


Annotation confidence Not enough data
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Genome context
Scf5bK3_265: 8587537-8587599 [+]

Database links

Mature pte-miR-277a-5p

Accession MIMAT0046116
Description Parasteatoda tepidariorum pte-miR-277a-5p mature miRNA
Sequence 1 - CGUUCCAGAAGUGCGUUUACA - 21
Evidence experimental
Illumina [1]

Mature pte-miR-277a-3p

Accession MIMAT0046117
Description Parasteatoda tepidariorum pte-miR-277a-3p mature miRNA
Sequence 42 - UAAAUGCAUUUUCUGGAAUGUA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144