miRBase entry: pte-mir-193b

Stem-loop pte-mir-193b


Accession
MI0038025
Description
Parasteatoda tepidariorum pte-mir-193b precursor miRNA

Literature search
1 open access papers mention pte-mir-193b
(2 sentences)

Sequence

UAUGGGUCUUGACAGAACAGACgauuuuauaaucUACUGGCCUGCUAAGUCCCACA
..((((.((((.(((..(((..((((....))))..)))..))).)))).))))..

Structure
UA    U    A   AA   AC    u 
  UGGG CUUG CAG  CAG  gauu u
  |||| |||| |||  |||  ||||  
  ACCC GAAU GUC  GUC  cuaa a
AC    U    C   CG   AU    u 


Annotation confidence Not enough data
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Genome context
Scf5bK3_1700: 847059-847114 [-]

Database links

Mature pte-miR-193b-5p

Accession MIMAT0046103
Description Parasteatoda tepidariorum pte-miR-193b-5p mature miRNA
Sequence 1 - UAUGGGUCUUGACAGAACAGAC - 22
Evidence experimental
Illumina [1]

Mature pte-miR-193b-3p

Accession MIMAT0046104
Description Parasteatoda tepidariorum pte-miR-193b-3p mature miRNA
Sequence 35 - UACUGGCCUGCUAAGUCCCACA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144