miRBase entry: pte-mir-190

Stem-loop pte-mir-190


Accession
MI0038023
Description
Parasteatoda tepidariorum pte-mir-190 precursor miRNA


Sequence

AGAUAUGUUUGAUAUUCUUGGUUGugucaauuuguucaACCAAGAAUCAGACAUAUAUGG
..(((((((((((..(((((((((............))))))))))))))))))))....

Structure
--AG           AU         uguca 
    AUAUGUUUGAU  UCUUGGUUG     a
    |||||||||||  |||||||||      
    UAUACAGACUA  AGAACCAac     u
GGUA           --         uuguu 


Annotation confidence Not enough data
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Genome context
Scf5bK3_485: 4297126-4297185 [-]

Database links

Mature pte-miR-190-5p

Accession MIMAT0046099
Description Parasteatoda tepidariorum pte-miR-190-5p mature miRNA
Sequence 1 - AGAUAUGUUUGAUAUUCUUGGUUG - 24
Evidence experimental
Illumina [1]

Mature pte-miR-190-3p

Accession MIMAT0046100
Description Parasteatoda tepidariorum pte-miR-190-3p mature miRNA
Sequence 39 - ACCAAGAAUCAGACAUAUAUGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144