miRBase entry: pte-mir-125a

Stem-loop pte-mir-125a


Accession
MI0038019
Description
Parasteatoda tepidariorum pte-mir-125a precursor miRNA

Literature search
1 open access papers mention pte-mir-125a
(4 sentences)

Sequence

UCCCUGAGACCCUAACUUGCGAuggcccgggucucCCAGGUUAGAUUCUCAGGUUUU
..(((((((..((((((((.((.(((....))))).))))))))..)))))))....

Structure
--UC       CC        C  u   c 
    CCUGAGA  CUAACUUG GA ggc c
    |||||||  |||||||| || |||  
    GGACUCU  GAUUGGAC cu cug g
UUUU       UA        C  -   g 


Annotation confidence Not enough data
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Genome context
Scf5bK3_446: 4938741-4938797 [+]

Database links

Mature pte-miR-125a-5p

Accession MIMAT0046092
Description Parasteatoda tepidariorum pte-miR-125a-5p mature miRNA
Sequence 1 - UCCCUGAGACCCUAACUUGCGA - 22
Evidence experimental
Illumina [1]

Mature pte-miR-125a-3p

Accession MIMAT0046093
Description Parasteatoda tepidariorum pte-miR-125a-3p mature miRNA
Sequence 36 - CCAGGUUAGAUUCUCAGGUUUU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144