miRBase entry: pte-mir-100a

Stem-loop pte-mir-100a


Accession
MI0038017
Description
Parasteatoda tepidariorum pte-mir-100a precursor miRNA

Literature search
1 open access papers mention pte-mir-100a
(5 sentences)

Sequence

UACCCGUAGAUCCGAACUUGUGuucacuugaacuccaCAAGUUUGAUUUUACGGGUUGA
.(((((((((..(((((((((((((....))))...)))))))))..)))))))))...

Structure
--U         UC         ---    a 
   ACCCGUAGA  CGAACUUGU   Guuc c
   |||||||||  |||||||||   ||||  
   UGGGCAUUU  GUUUGAACa   caag u
AGU         UA         ccu    u 


Annotation confidence Not enough data
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Genome context
Scf5bK3_446: 4913478-4913536 [+]

Database links

Mature pte-miR-100a-5p

Accession MIMAT0046088
Description Parasteatoda tepidariorum pte-miR-100a-5p mature miRNA
Sequence 1 - UACCCGUAGAUCCGAACUUGUG - 22
Evidence experimental
Illumina [1]

Mature pte-miR-100a-3p

Accession MIMAT0046089
Description Parasteatoda tepidariorum pte-miR-100a-3p mature miRNA
Sequence 38 - CAAGUUUGAUUUUACGGGUUGA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144