Stem-loop pte-mir-1

Accession

MI0038015

Description

Parasteatoda tepidariorum pte-mir-1 precursor miRNA

Sequence

CCGUGCUUCCUUACUUCCCAUAucuucuuaaagagucguaUGGAAUGUAAAGAAGUAUGGAG
(((((((((.((((...((((((.((((...))))..))))))...)))).)))))))))..

Structure

--         C    UUC      -c    u 
  CCGUGCUUC UUAC   CCAUAu  uucu  
  ||||||||| ||||   ||||||  |||| a
  GGUAUGAAG AAUG   GGUaug  gaga  
GA         A    UAA      cu    a 

Annotation confidence Not enough data

Genome context

Scf5bK3_269: 5291341-5291402 [+]

Mature pte-miR-1-5p

• Accession: MIMAT0046084
• Description: Parasteatoda tepidariorum pte-miR-1-5p mature miRNA
• Sequence: 1 - CCGUGCUUCCUUACUUCCCAUA - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-1-3p

• Accession: MIMAT0046085
• Description: Parasteatoda tepidariorum pte-miR-1-3p mature miRNA
• Sequence: 41 - UGGAAUGUAAAGAAGUAUGGAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144