Stem-loop sequence pte-bantam

Accession

MI0038009 (change log)

Description

Parasteatoda tepidariorum bantam stem-loop

Stem-loop

   --cu       c        auc    ggaau 
5'     gguuuuc caaugauc   caga     a
       ||||||| ||||||||   ||||     u
3'     ucgaaag guuacuag   gucu     a
   uuag       u        --a    aaagu 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates: Scf5bK3_3958: 148742-148804 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038009

Mature sequence pte-bantam-5p

• Accession: MIMAT0046075
• Sequence: 1 - cugguuuucccaaugaucaucca - 23
• Evidence: experimental; Illumina [1]

Mature sequence pte-bantam-3p

• Accession: MIMAT0046076
• Sequence: 41 - ugagaucauugugaaagcugauu - 63
• Evidence: experimental; Illumina [1]

References

1. PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).