miRBase entry: tca-mir-11645

Stem-loop tca-mir-11645


Accession
MI0037454
Description
Tribolium castaneum tca-mir-11645 precursor miRNA


Sequence

UAUAGCCCGGACACUAACGAAAUcgccaaaccguccgagcuuuugguuagcguccgcgccuacau
....((.(((((.(((((.(((..(((.........).)).))).))))).))))).))......

Structure
--UAUA  C     A     G   Uc  - aaa 
      GC CGGAC CUAAC AAA  gc c   c
      || ||||| ||||| |||  || |   c
      cg gccug gauug uuu  cg g   g
uacauc  c     c     g   -u  a ccu 


Annotation confidence Not enough data
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Genome context
Unmapped9: 551281-551345 [+]

Database links

Mature tca-miR-11645-5p

Accession MIMAT0045618
Description Tribolium castaneum tca-miR-11645-5p mature miRNA
Sequence 1 - UAUAGCCCGGACACUAACGAAAU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96