miRBase entry: tca-mir-307b

Stem-loop tca-mir-307b

Accession

MI0037452

Description

Tribolium castaneum tca-mir-307b precursor miRNA

Sequence

UCACUCAAGGAGGUUGUGAUGguacagcaaacacaUCACACCCAGGUUGAGUGAGUCa
((((((((...((.(((((((((.......)).))))))).))...))))))))....

Structure

----        GGA  U       -  ac 
    UCACUCAA   GG UGUGAUG gu  a
    ||||||||   || ||||||| ||  g
    AGUGAGUU   CC ACACUac ca  c
aCUG        GGA  C       a  aa

Annotation confidence Not enough data

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Genome context

ChLG8: 12648350-12648407 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tca-mir-307b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-307b-5p

Accession	MIMAT0045614
Description	Tribolium castaneum tca-miR-307b-5p mature miRNA
Sequence	1 - UCACUCAAGGAGGUUGUGAUG - 21
Evidence	experimental Illumina [1]

Mature tca-miR-307b-3p

Accession	MIMAT0045615
Description	Tribolium castaneum tca-miR-307b-3p mature miRNA
Sequence	36 - UCACACCCAGGUUGAGUGAGUC - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96