miRBase entry: tca-mir-11639

Stem-loop tca-mir-11639

Accession

MI0037437

Description

Tribolium castaneum tca-mir-11639 precursor miRNA

Sequence

ggguaagcagagguuuuacauuuuguuuuugaaggaUGAGAUCCUCUUGCUUUCCCAAa
(((.(((((((((.(((.((((((........))))))))).)))).))))).)))...

Structure

---   u     -    u   a      guu 
   ggg aagca gagg uuu cauuuu   u
   ||| ||||| |||| ||| ||||||    
   CCC UUCGU CUCC AGA GUagga   u
aAA   U     U    U   -      agu

Annotation confidence Not enough data

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Genome context

ChLG2: 1348633-1348691 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from tca-mir-11639

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-11639-3p

Accession	MIMAT0045597
Description	Tribolium castaneum tca-miR-11639-3p mature miRNA
Sequence	37 - UGAGAUCCUCUUGCUUUCCCAA - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96