miRBase entry: tca-mir-11638

Stem-loop tca-mir-11638


Accession
MI0037435
Description
Tribolium castaneum tca-mir-11638 precursor miRNA


Sequence

ugaaaucgugcauguuucuguaauguugguugcauagcaaaaccauuUCAGGGCAUGACACGGGUUCGAGu
((((.(((((((((((.(((.((((....((((...))))...)))).))))))))).))))).))))...

Structure
---    a     -      u   u    uugg    a 
   ugaa ucgug cauguu cug aaug    uugc  
   |||| ||||| |||||| ||| ||||    |||| u
   GCUU GGCAC GUACGG GAC uuac    aacg  
uGA    G     A      -   U    -caa    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ChLGX: 5682408-5682478 [+]

Database links

Mature tca-miR-11638-3p

Accession MIMAT0045595
Description Tribolium castaneum tca-miR-11638-3p mature miRNA
Sequence 48 - UCAGGGCAUGACACGGGUUCGAG - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96