miRBase entry: tca-mir-3806c

Stem-loop tca-mir-3806c


Accession
MI0037433
Description
Tribolium castaneum tca-mir-3806c precursor miRNA


Sequence

cuacguacggauacguacauauuuuuugaacaaucaaaaUAUGUGUAUUCGUGCGUAGCAu
((((((((((((((..((((((((..(((....)))))))))))))))))))))))))...

Structure
---              gu        uu   a 
   cuacguacggauac  acauauuu  uga c
   ||||||||||||||  ||||||||  |||  
   GAUGCGUGCUUAUG  UGUAUaaa  acu a
uAC              --        --   a 


Annotation confidence Not enough data
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Genome context
ChLGX: 5784537-5784597 [-]
Clustered miRNAs
30 other miRNAs are < 10 kb from tca-mir-3806c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tca-miR-3806c-3p

Accession MIMAT0045593
Description Tribolium castaneum tca-miR-3806c-3p mature miRNA
Sequence 40 - UAUGUGUAUUCGUGCGUAGCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96