miRBase entry: tca-mir-11636

Stem-loop tca-mir-11636


Accession
MI0037432
Description
Tribolium castaneum tca-mir-11636 precursor miRNA


Sequence

UGAGGUCUCGUUUGCUAAAUUuuaauuuaacaaaAUUUAGGAACAUGAUUCUCAGAc
(((((..((((((.(((((((((........))))))))).)).)))).)))))...

Structure
---     UC    -  G         aau 
   UGAGG  UCGU UU CUAAAUUuu   u
   |||||  |||| || |||||||||    
   ACUCU  AGUA AA GAUUUAaaa   u
cAG     -U    C  G         caa 


Annotation confidence Not enough data
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Genome context
ChLGX: 5788871-5788927 [-]
Clustered miRNAs
36 other miRNAs are < 10 kb from tca-mir-11636
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tca-miR-11636-5p

Accession MIMAT0045591
Description Tribolium castaneum tca-miR-11636-5p mature miRNA
Sequence 1 - UGAGGUCUCGUUUGCUAAAUU - 21
Evidence experimental
Illumina [1]

Mature tca-miR-11636-3p

Accession MIMAT0045592
Description Tribolium castaneum tca-miR-11636-3p mature miRNA
Sequence 35 - AUUUAGGAACAUGAUUCUCAGA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96