miRBase entry: tca-mir-11635

Stem-loop tca-mir-11635

Accession

MI0037431

Description

Tribolium castaneum tca-mir-11635 precursor miRNA

Sequence

ggcgugcuucgcuccauagauuuuguauucgagaaaUCUUUGGAGUGUUGAACGUCAca
(((((.(..(((((((.(((((((........))))))).)))))))..).)))))...

Structure

---     g uu       u       gua 
   ggcgu c  cgcucca agauuuu   u
   ||||| |  ||||||| |||||||    
   CUGCA G  GUGAGGU UCUaaag   u
acA     A UU       U       agc

Annotation confidence Not enough data

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Genome context

ChLGX: 5795359-5795417 [-]

Clustered miRNAs

22 other miRNAs are < 10 kb from tca-mir-11635

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-11635-3p

Accession	MIMAT0045590
Description	Tribolium castaneum tca-miR-11635-3p mature miRNA
Sequence	37 - UCUUUGGAGUGUUGAACGUCA - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96