Stem-loop tca-mir-11632

Accession

MI0037423

Description

Tribolium castaneum tca-mir-11632 precursor miRNA

Sequence

aauucucuaaacaugcuauacuuugauuuUAGUAAGGAUUUUAAUAAGGUUCCCCGCagguuuuuuaauaaauaacucaaaauuaagugguuuaucagacccccUGUUGUCAUGGGUAAAAAGUUUUUUAACCaaucaaaguuuugcggugaaagaua
.....(((..((.(((...(((((((((.....(((((((((.......((.((((((((...(((.((((((.(((........))).)))))).)))...)))))......))).))))))))))).....)))))))))...)))))...)))..

Structure

aauuc   -aa  a   uau         uUAGU         AAUAAGG  C   ------     uuu   a      a   caa 
     ucu   ac ugc   acuuugauu     AAGGAUUUU       UU CCC      GCagg   uuu auaaau acu   a
     |||   || |||   |||||||||     |||||||||       || |||      |||||   ||| |||||| |||    
     aga   ug gcg   ugaaacuaa     UUUUUGAAA       AA GGG      UGUcc   aga uauuug uga   a
---au   aag  -   uuu         CCAAU         -------  U   UACUGU     ccc   c      g   auu 

Annotation confidence Not enough data

Genome context

ChLG6: 8740458-8740615 [+]

Mature tca-miR-11632-5p

• Accession: MIMAT0045579
• Description: Tribolium castaneum tca-miR-11632-5p mature miRNA
• Sequence: 30 - UAGUAAGGAUUUUAAUAAGGUUCCCCGC - 57
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11632-3p

• Accession: MIMAT0045580
• Description: Tribolium castaneum tca-miR-11632-3p mature miRNA
• Sequence: 105 - UGUUGUCAUGGGUAAAAAGUUUUUUAACC - 133
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96