miRBase entry: tca-mir-11622

Stem-loop tca-mir-11622


Accession
MI0037379
Description
Tribolium castaneum tca-mir-11622 precursor miRNA


Sequence

acuaaaucaguugaugUAAAGGAAUUGCAGGAUUGAAAugucugcagcguuUUAGUCUUGUAAAUUCCUUUGGGuuuacugauaaaaa
.....((((((.(((.(((((((((((((((((((((((((.....))))))))))))))).)))))))))).))).)))))).....

Structure
acuaa      u   g          -               c 
     aucagu gau UAAAGGAAUU GCAGGAUUGAAAugu u
     |||||| ||| |||||||||| ||||||||||||||| g
     uaguca uuG GUUUCCUUAA UGUUCUGAUUuugcg c
aaaaa      u   G          A               a 


Annotation confidence Not enough data
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Genome context
ChLG3: 1732366-1732453 [-]

Database links

Mature tca-miR-11622-5p

Accession MIMAT0045517
Description Tribolium castaneum tca-miR-11622-5p mature miRNA
Sequence 17 - UAAAGGAAUUGCAGGAUUGAAA - 38
Evidence experimental
Illumina [1]

Mature tca-miR-11622-3p

Accession MIMAT0045518
Description Tribolium castaneum tca-miR-11622-3p mature miRNA
Sequence 52 - UUAGUCUUGUAAAUUCCUUUGGG - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96