Stem-loop sequence bdo-mir-5a

AccessionMI0037299 (change log)
DescriptionBactrocera dorsalis miR-5a stem-loop
Literature search

2 open access papers mention bdo-mir-5a
(6 sentences)

Stem-loop
   --       cgu             cguacac 
5'   aaaggaa   ucguugugauaua       u
     |||||||   |||||||||||||        
3'   uuuccuu   agugacacuauau       u
   ua       -uu             aagaaau 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM78921v2; GCA_000789215.2) Overlapping transcripts
scaffold00054: 203235-203297 [-]
intergenic
Clustered miRNAs
< 10kb from bdo-mir-5a
bdo-mir-5b-1scaffold00054: 206689-206749 [-]
bdo-mir-309bscaffold00054: 205267-205336 [-]
bdo-mir-286scaffold00054: 204944-205010 [-]
bdo-mir-5b-2scaffold00054: 204041-204101 [-]
bdo-mir-6scaffold00054: 203903-203964 [-]
bdo-mir-309ascaffold00054: 203737-203796 [-]
bdo-mir-4scaffold00054: 203559-203615 [-]
bdo-mir-5ascaffold00054: 203235-203297 [-]
Database links

Mature sequence bdo-miR-5a

Accession MIMAT0045422
Sequence

1 - 

aaaggaacguucguugugauau

 - 22

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Evidence experimental; Torrent [1]

References

1