Stem-loop sequence bdo-mir-13b

AccessionMI0037286 (change log)
DescriptionBactrocera dorsalis miR-13b stem-loop
Literature search

1 open access papers mention bdo-mir-13b
(3 sentences)

Stem-loop 
   ---           u     uu    ---uc  c 
5'    ucguuaaaaug uugug  uaug     gc a
      ||||||||||| |||||  ||||     || u
3'    agcaguuuuac gacac  auac     cg u
   uug           c     -u    ucaua  u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM78921v2; GCA_000789215.2) Overlapping transcripts
scaffold00020: 1021893-1021956 [+]
intergenic
Clustered miRNAs
< 10kb from bdo-mir-13b
bdo-mir-2cscaffold00020: 1019361-1019425 [+]
bdo-mir-13bscaffold00020: 1021893-1021956 [+]
Database links

Mature sequence bdo-miR-13b

Accession MIMAT0045409
Sequence

42 -  

uaucacagccauuuugacgaguu

 - 64

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Evidence experimental; Torrent [1]

References

1
PMID:26438165 "MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae" Calla B, Geib SM BMC Genomics. 16:740(2015).