Stem-loop lja-MIR11159

Accession

MI0035934

Description

Lotus japonicus lja-MIR11159 precursor miRNA

Sequence

uuugauaacaguuuccaaaacaguuuucaguuuuuaaaaACUGAAAACUUGUUUGGUAAGACCuguuuucaaa
.((((.(((((((((((((..((((((((((((....))))))))))))..)))))..))).))))).)))).

Structure

u    u     -   --     ac            u 
 uuga aacag uuu  ccaaa  aguuuucaguuu u
 |||| ||||| |||  |||||  ||||||||||||  
 aacu uuguC AGA  GGUUU  UCAAAAGUCAaa a
a    u     C   AU     GU            a 

Annotation confidence Not enough data

Genome context

Chr2: 35135995-35136067 [+]

Mature lja-miR11159-3p

• Accession: MIMAT0043956
• Description: Lotus japonicus lja-miR11159-3p mature miRNA
• Sequence: 40 - ACUGAAAACUUGUUUGGUAAGACC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256