miRBase entry: lja-MIR11125

Stem-loop lja-MIR11125


Accession
MI0035868
Description
Lotus japonicus lja-MIR11125 precursor miRNA


Sequence

uaacuguggcaauAGAGGUCACCUGUUGUCACGGUuacguucuuaaccguggcaaaagguggccucuauugcaacgguua
(((((((.((((((((((((((((.((((((((((((......)))))))))))).)))))))))))))))).)))))))

Structure
       g                G            cg 
uaacugu gcaauAGAGGUCACCU UUGUCACGGUua  u
||||||| |||||||||||||||| ||||||||||||   
auuggca cguuaucuccggugga aacggugccaau  u
       a                a            uc 


Annotation confidence Not enough data
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Genome context
Chr3: 12692855-12692934 [-]

Database links

Mature lja-miR11125-5p

Accession MIMAT0043873
Description Lotus japonicus lja-miR11125-5p mature miRNA
Sequence 14 - AGAGGUCACCUGUUGUCACGGU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25967282
    micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
    "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
    "New Phytol (2015) 208:241-256