miRBase entry: lja-MIR11106

Stem-loop lja-MIR11106


Accession
MI0035825
Description
Lotus japonicus lja-MIR11106 precursor miRNA


Sequence

ucUUAUCAUAUCCUGUGUUUGAGgugcacaugaUAAGAACAGGAUAUGAUAAGG
.(((((((((((((((.((((..((....))..)))).))))))))))))))).

Structure
u               G    AG  g 
 cUUAUCAUAUCCUGU UUUG  gu c
 ||||||||||||||| ||||  ||  
 GAAUAGUAUAGGACA GAAU  ua a
G               A    ag  c 


Annotation confidence Not enough data
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Genome context
Chr0: 32160409-32160462 [+]

Database links

Mature lja-miR11106-5p

Accession MIMAT0043811
Description Lotus japonicus lja-miR11106-5p mature miRNA
Sequence 3 - UUAUCAUAUCCUGUGUUUGAG - 23
Evidence experimental
Illumina [1]

Mature lja-miR11106-3p

Accession MIMAT0043812
Description Lotus japonicus lja-miR11106-3p mature miRNA
Sequence 34 - UAAGAACAGGAUAUGAUAAGG - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25967282
    micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
    "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
    "New Phytol (2015) 208:241-256