miRBase entry: lja-MIR11094

Stem-loop lja-MIR11094


Accession
MI0035803
Description
Lotus japonicus lja-MIR11094 precursor miRNA


Sequence

gguuugauaguauaaggucuaauaguAUUAGGCCUGAUAGUAUAAGCu
((((((.((.(((.(((((((((...))))))))).))).))))))))

Structure
      a  g   a         a 
gguuug ua uau aggucuaau  
|||||| || ||| ||||||||| g
uCGAAU AU AUA UCCGGAUUA  
      -  G   G         u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lja-miR11094-3p

Accession MIMAT0043783
Description Lotus japonicus lja-miR11094-3p mature miRNA
Sequence 27 - AUUAGGCCUGAUAGUAUAAGC - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25967282
    micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
    "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
    "New Phytol (2015) 208:241-256