Stem-loop sequence mdm-MIR393h

Accession

MI0035637 (change log)

Description

Malus domestica miR393h stem-loop

Literature search

6 open access papers mention mdm-MIR393h
(31 sentences)

Stem-loop

   uuaauu              c            c    u     c      cuauuua 
5'       gcuucuagaggagg auccaaagggau gcau gaucc agcuaa       u
         |||||||||||||| |||||||||||| |||| ||||| ||||||       g
3'       cgaagguuuccucu uagguuucccua cgua cuagg uugguu       u
   -aacuu              u            u    -     u      cgcuacc 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates: MDC012883.431: 61501-61617 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0035637

Mature sequence mdm-miR393h

• Accession: MIMAT0043584
• Sequence: 78 - aucaugcuaucccuuuggauu - 98
• Evidence: experimental; Illumina [1]

References

1. "Identification of apple miRNAs and their potential role in fire blight resistance" Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I Trees Genet Genomes. 11:812(2014).