Stem-loop sly-MIR7981b

Accession

MI0033704

Description

Solanum lycopersicum sly-MIR7981b precursor miRNA

Sequence

uuuuuACCCCUUUUUAGCUUACGUGGCACuaucuugugggcucaacgaugauugacuuuuuuuuugaacuagugccacguagacuaaaaagggguagaaaau
(((((((((((((((((.(((((((((((((((....(((.((((......))))))).......))..))))))))))))).)))))))))))))))))..

Structure

--                 C             --  ---uugu   c    cg 
  uuuuuACCCCUUUUUAG UUACGUGGCACua  uc       ggg ucaa  a
  ||||||||||||||||| |||||||||||||  ||       ||| ||||   
  aaagauggggaaaaauc gaugcaccgugau  ag       uuc aguu  u
ua                 a             ca  uuuuuuu   -    ag 

Annotation confidence Not enough data

Genome context

chr1: 2860001-2860102 [+]

Mature sly-miR7981b

• Accession: MIMAT0042030
• Description: Solanum lycopersicum sly-miR7981b mature miRNA
• Sequence: 6 - ACCCCUUUUUAGCUUACGUGGCAC - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25218481
   Prediction and characterization of Tomato leaf curl New Delhi virus (ToLCNDV) responsive novel microRNAs in Solanum lycopersicum
   "Pradhan B, Naqvi AR, Saraf S, Mukherjee SK, Dey N"
   "Virus Res (2015) 195:183-195