Stem-loop sequence sly-MIR319d

AccessionMI0033681 (change log)
DescriptionSolanum lycopersicum miR319d stem-loop
Literature search

22 open access papers mention sly-MIR319d
(146 sentences)

Stem-loop 
   --  a          g          ccc       gguauu        u   u   g   a        cu  u         aa    ga ga 
5'   ag gaaggaaacu uuuaguccaa   aaggugg      ggaacuga cuu gcu cug aucauugg  ca gagcauguc  agaa  u  u
     || |||||||||| ||||||||||   |||||||      |||||||| ||| ||| ||| ||||||||  || |||||||||  ||||  |   
3'   uc cuuccuuugg aagucagguu   uuccgcc      uuuuggcu gag cga gac uaguaacc  gu cuuguacag  ucuu  a  u
   cu  c          g          cuu       ---acu        c   u   g   g        uc  u         -g    ac ag
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (SL2.50; GCA_000188115.2) Overlapping transcripts
chr3: 67741504-67741691 [+]
intergenic
Database links

Mature sequence sly-miR319d

Accession MIMAT0042007
Sequence

6 -  

aggaaacuguuuaguccaacc

 - 26

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Evidence experimental; Illumina [1]

References

1
PMID:25218481 "Prediction and characterization of Tomato leaf curl New Delhi virus (ToLCNDV) responsive novel microRNAs in Solanum lycopersicum" Pradhan B, Naqvi AR, Saraf S, Mukherjee SK, Dey N Virus Res. 195:183-195(2015).