Stem-loop sly-MIR10528

Accession

MI0033680

Description

Solanum lycopersicum sly-MIR10528 precursor miRNA

Sequence

uaaugAAUGCAAUGUCAUAUACCAUCaacacuuggaaacucaaauugagguuaaaucucggagugaugaugguauaugaccuugcaauucacuaug
...(((((((((.((((((((((((((.(((((.((..((((...))))........)).))))).)))))))))))))).)))).))))).....

Structure

--uaa     -    U              a     g  ------aa    a 
     ugAAU GCAA GUCAUAUACCAUCa cacuu ga        cuca  
     ||||| |||| |||||||||||||| ||||| ||        |||| a
     acuua cguu caguauaugguagu gugag cu        gagu  
guauc     a    c              a     g  cuaaauug    u 

Annotation confidence Not enough data

Genome context

chr5: 61499820-61499915 [+]

Mature sly-miR10528

• Accession: MIMAT0042006
• Description: Solanum lycopersicum sly-miR10528 mature miRNA
• Sequence: 6 - AAUGCAAUGUCAUAUACCAUC - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25218481
   Prediction and characterization of Tomato leaf curl New Delhi virus (ToLCNDV) responsive novel microRNAs in Solanum lycopersicum
   "Pradhan B, Naqvi AR, Saraf S, Mukherjee SK, Dey N"
   "Virus Res (2015) 195:183-195