miRBase entry: sfr-mir-10512

Stem-loop sfr-mir-10512


Accession
MI0033657
Description
Spodoptera frugiperda sfr-mir-10512 precursor miRNA


Sequence

gCACGGAUUAUUGACAUGGCcuuggugaguacaaggacuguagucuucauaauaaggggugagcuuauugcgaaauaccagcuAUAAUUCCGGAUUUGUGCUC
(((((((((...((((((((((((.......))))).)))).)))..........(((((.((((((((....))))..))))...))))).)))))))))..

Structure
--         --------------------------------------------AUU   -    -     gu 
  gCACGGAUU                                               GAC AUGG Ccuug  g
  |||||||||                                               ||| |||| |||||  a
  CGUGUUUAG                                               cug uguc ggaac  g
CU         GCCUUAAUAucgaccauaaagcguuauucgaguggggaauaauacuu   a    a     au 


Annotation confidence Not enough data
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Genome context
JQCY02000371.1: 93249-93351 [+]

Database links

Mature sfr-miR-10512-5p

Accession MIMAT0041976
Description Spodoptera frugiperda sfr-miR-10512-5p mature miRNA
Sequence 2 - CACGGAUUAUUGACAUGGC - 20
Evidence experimental
Illumina [1]

Mature sfr-miR-10512-3p

Accession MIMAT0041977
Description Spodoptera frugiperda sfr-miR-10512-3p mature miRNA
Sequence 84 - AUAAUUCCGGAUUUGUGCUC - 103
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988