Stem-loop sequence sfr-mir-317

AccessionMI0033603 (change log)
DescriptionSpodoptera frugiperda miR-317 stem-loop
Literature search

1 open access papers mention sfr-mir-317
(1 sentences)

Stem-loop 
          c -        --      c  u   gggaa 
5' gaacgac g ggugccac  gcugug uc cuc     u
   ||||||| | ||||||||  |||||| || |||     u
3' cuuguug c cuauggug  cgacac ag gag     a
          a u        gu      a  u   acgua
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM75363v2; GCA_000753635.2) Overlapping transcripts
JQCY02003144.1: 10491-10566 [+]
intergenic
Clustered miRNAs
< 10kb from sfr-mir-317
sfr-mir-317JQCY02003144.1: 10491-10566 [+]
sfr-mir-10466JQCY02003144.1: 10758-10820 [+]
Database links

Mature sequence sfr-miR-317-5p

Accession MIMAT0041884
Sequence

9 -  

gggugccacgcugugcucucu

 - 29

Get sequence
Evidence experimental; Illumina [1]

Mature sequence sfr-miR-317-3p

Accession MIMAT0041885
Sequence

47 -  

ugaacacagcuggugguaucu

 - 67

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25693181 "Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21" Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK PLoS One. 10:e0116988(2015).